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Table 3 Nutrient uptakes in the iNJ661v network.

From: Development and analysis of an in vivo-compatible metabolic network of Mycobacterium tuberculosis

Uptake type

Nutrients

Supporting Literature (References)

Default uptakes

H2O

H+

 
 

Oxygen

O2

[7, 31]

 

Phosphorus

HPO42-

 

Uptakes of small

Sulphur

SO42-

 

molecules

Iron

Fe3+

[64]

 

Potassium

K+

 
 

Sodium

Na+

 
 

Nitrogen

NO3-, NH4+

[63]

Uptakes added in Step II

Hexadecanoate,

octadecanoate,

octanoate,

dodecanoate,

arachidic acid, and

hexacosanoate

[8, 28, 32, 52–57]

  

Isoleucine and

valine

[61]

  

cytidine and

xylose

 

Other necessary uptakes

Glycerol

[8, 28, 32, 52–57]