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Table 5 Simulations of gain of function mutants

From: Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche

Gene

Model A

Model A'

Model B

Model B'

Model A-I

SHR

NR

NR

NR

NR

YES

SCR

NC

NC

NC

NC

NC

MGP

NC

NC

NC

NC

NC

JKD

NC

NC

NC

NC

NC

WOX5

YES

YES

YES

YES

YES

PLT

YES

YES

YES

YES

YES

ARF

NC

NC

NC

NC

NC

Aux/IAA

YES

YES

YES

YES

YES

Auxin

NC

NC

NC

NC

NC

  1. When we did not recover the expected genetic configurations, we distinguish two situations: not recovered (NR), which indicates that even though experimental data was available it was not recapitulated and not enough data for comparison (NC), which indicates that experimental data was lacking, so in these cases a comparison could not be done. The coupled GRN results are reported in (A-I).