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Table 3 Jaccard coefficients showing agreement between significant subnetworks obtained by PFSNet and SPSNet on training and test data

From: SPSNet: subpopulation-sensitive network-based analysis of heterogeneous gene expression data

  Training Test Training ∩ test Training test Jaccard coefficient
PFSNet 27 24 11 40 0.28
SPSNet 87 77 62 102 0.61
  1. Subnetworks reported significantly differentially expressed by SPSNet in the heterogeneous ALL phenotype are more reproducible (jaccard coefficients marked in bold) than PFSNet across training and test data