From: Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size
Category
Methods
Cor-based
MI-based
Ref.
Deal with indirect edges explicitly
RLowPC
Yes
PC
[2, 45]
PCIT
[33, 38, 50, 51]
MRNET
[29, 33, 39, 50]
MRNETB
[27, 29, 33, 50]
ARACNE
[28, 33, 50]
Not deal with indirect edges
Cor
CLR
[33, 48, 50]
Random