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Fig. 9 | BMC Systems Biology

Fig. 9

From: Image analysis driven single-cell analytics for systems microbiology

Fig. 9

Segmentation of overcrowded and merging colonies. The four colonies in frame 65 of movie Multi-SalPhase (left) are merged several frames later (frame 78, right). Top panels: input image frames. Bottom panels: Segmentation results: The cyan boxes report the TP, FN and FP for each colony. The red boxes summarize the evaluation measures for each frame. Pseudo-colors are used to make cell boundaries visible. BaSCA achieves both high recall and high precision and an F-measure over 94%

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