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Table 7 Specificity and runtime comparison using real tumors

From: SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations

Caller FP Specificity (%) Time (h)
SNVSniffer(M1) 12387 99.9995 1.8
SomaticSniper 209530 99.9923 1.2
VarScan2 4507 99.9998 2.9
JSM2 38550 99.9986 5.0
MuTect 2463700 99.9096 8.7
  1. Best results are highlighted in boldface