Skip to main content

Table 2 Odds ratio logistic regression associations GWAS on compound phenotypes. Entries show locus w/ minor allele, and the odds ratio, 95 % confidence interval, and p-value for the SNP vs. the phenotype

From: Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis

Locus Association OR
Minor Allele   (95 % CI)
   p-value
rs12365545 DxT2D 1.69
A   (1.38–2.07)
   4.434×10−7
rs12365545 DxHT 1.44
A   (1.24–1.67)
   8.329×10−7
rs6847235 DxHL 1.45
A   (1.25–1.68)
   5.344×10−7
rs701319 DxHL 0.57
T   (0.46–0.71)
   6.821×10−7
  1. Genome wide p-value threshold =6.338×10−7