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Table 2 Average shortest length among top ranked genes

From: Dynamic protein interaction modules in human hepatocellular carcinoma progression

Top level

Gene set

HCC transition

  

N-C

C-D

D-E

E-A

0.1%

DEG

3.61 ± 0.59

3.25 ± 0.86

3.40 ± 0.91

4.25 ± 0.86

 

DCG

2.96 ± 0.71

2.94 ± 0.74

2.72 ± 0.75

2.98 ± 0.75

0.5%

DEG

3.70 ± 0.78 a

3.62 ± 0.85

3.76 ± 0.82

3.62 ± 0.85 b

 

DCG

2.89 ± 0.71

2.81 ± 0.68

2.82 ± 0.73

2.89 ± 0.70

1.0%

DEG

3.60 ± 0.81 c

3.63 ± 0.84

3.67 ± 0.81 d

3.60 ± 0.87 e

 

DCG

2.87 ± 0.69

2.85 ± 0.76

2.86 ± 0.70

2.90 ± 0.71

  1. There were 3.6% a, 10.7% b, 1.8%c, or 5.4%d,e disconnected DEG pairs and they were excluded from the average shortest length calculation.