Table 3 C. jejuni-E. coli alignment results
From: Corbi: a new R package for biological network alignment and querying
Method | MI-GRAAL | CNetQ | CNetA | BLASTQ | BLASTA |
|---|---|---|---|---|---|
MP | 1091 | 444 | 677 | 533 | 711 |
EC | 21.48% | 1.69% | 1.21% | 0.37% | 0.84% |
LCCS | 513(544) | 7(6) | 7(6) | 3(2) | 4(3) |
GO coverage (depth ≥ 3) | |||||
MF | 6.94% | 27.70% | 30.58% | 30.96% | 32.21% |
BP | 4.32% | 23.87% | 26.44% | 28.33% | 30.38% |
CC | 5.44% | 12.39% | 14.33% | 13.88% | 14.35% |
KEGG analysis | |||||
OP | 11 | 95 | 146 | 152 | 206 |
HP | 4 | 10 | 11 | 10 | 11 |
PAC | 10.23% | 15.40% | 29.61% | 21.91% | 36.68% |