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Table 1 Parameter values for the probabilities of reactions in the stressosome

From: Simulations of stressosome activation emphasize allosteric interactions between RsbR and RsbT

Parameter

Meaning

Value

kphr

Phosphorylation of RsbR

0.1 / 1

kdpr

Dephosphorylation of RsbR-P

0.06

kphs

Phosphorylation of RsbS

0.4

kdps

Dephosphorylation of RsbS-P

1

  1. The parameter kphr, the phosphorylation probability, has two values, the first for stress-free, the second for stress-response conditions. To consider the effects of neighbours, the parameter kphr is multiplied by an allosteric parameter (Table 3).