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Table 1 Summary comparison between ambient and GiGA

From: AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response

 

ambient

GiGA

No. of significant modules

4

6

No. of reactions in significant modules

164

220

Q-value of top module

<10-4

<10-50

No. of reactions in top module

112

75

Comparison

F-measure (significant modules)

0.363

F-measure (top modules)

0.461

Adjusted Rand

0.288

  1. Summary statistics comparing the GiGA and ambient approaches to analysing the diauxic shift of Saccharomyces cerevisiae on glucose starvation.