Table 1 Models and factors that discriminate the tissue of origins via joint and separate analysis
From: Multilevel omic data integration in cancer cell lines: advanced annotation and emergent properties
Methods | Â | Â | Joint | Â | Separate | Â | Â |
|---|---|---|---|---|---|---|---|
Data | Â | Â | mRNA & Prot & miRNA | Â | mRNA | Prot | miRNA |
Best Model | Â | Â | M8 | Â | M8 | M10 | M9 |
|  | ME |  | F1 (0.98, 3×10−13) |  | F1 (0.98, 3×10−13) | F4 (0.93, 7×10−9) | F1 (0.98, 3×10−13) |
|  | CO |  | F2 (0.97, 8×10−11) |  | F2 (1, 7×9−15) | F8 (0.92, 1×10−5) | F2 (0.95, 2×10−9) |
|  | LE |  | F3 (1.0, 9×10−15) |  | F3 (1, 9×10−15) | F1 (0.98, 1×10−12) | F3 (1.0, 9×10−15) |
Tissue & Factor | RE |  | F4 (0.98, 7×10−13) |  | F4 (0.97, 7×10−13) | F10 (0.93, 1×10−7) | F7 (0.93, 3×10−7) |
|  | OV |  | F5 (0.9, 2×10−3) |  | F5 (0.92, 1×10−5) | F3 (0.9, 3×10−3) | F9 (0.92, 8×10−5) |
|  | LC |  | F7 (0.95, 8×10−10) |  | F7 (0.92, 8×10−7) | F2 (0.93, 3×10−8) | NA |
|  | CNS |  | F8 (0.97, 5×10−10) |  | F8 (0.93, 2×10−5) | F7 (0.95, 5×10−8) | F8 (0.95, 1×10−3) |