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Figure 1 | BMC Systems Biology

Figure 1

From: Network component analysis provides quantitative insights on an Arabidopsis transcription factor-gene regulatory network

Figure 1

Initial connectivity map of TF-gene interactions documented in AGRIS. Connections between 10 TFs (violet) important in floral development and their 57 target genes (light blue). Edges from TFs to genes indicate target genes of TFs: a solid green edge indicates gene activation, a dashed red edge indicates gene repression and solid gray edges indicate an unknown interaction. [The gene abbreviations and the corresponding Arabidopsis gene model are: 1 - NAP (At1g69490), 2 - CRC (At1g69180), 3 - GIK (At2g35270), 4 - APL (At2g27330), 5 - AGL2 (At5g15800), 6 - AGL4 (At3g02310), 7 - AGL8 (At5g60910), 8 - AGL3 (At2g03710), 9 - ACS8 (At4g37770), 10 - ADR1 (At1g33560), 11 - INV1 (At1g02810), 12 - UNK4 (At1g56660), 13 - FAD bin (At1g57770), 14 - UNK5 (At2g25460), 15 - UNK6 (At2g25890), 16 - AP1 (At1g69120), 17 - FLO10 (At3g23130), 18 - AG (At4g18960), 19 - AGL5 (At2g42830), 20 - AGL1 (At3g58780), 21 - HLH1 (At2g42870), 22 - RD20 (At2g33380), 23 - EDF4 (At1g13260), 24 - AGL22 (At2g22540), 25 - RAV2 (At1g68840), 26 - ACR7 (At4g22780), 27 - ASN1 (At3g47340), 28 - BGLU15 (At2g44450), 29 - BZIP (At1g68880), 30 - AGL10 (At1g26310), 31 - UNK1 (At5g03230), 32 - LEA (At3g52470), 33 - UNK2 (At1g61830), 34 - LEU1 (At5g49770), 35 - HB51 (At5g03790), 36 - GRA1 (At3g19390), 37 - UNK3 (At5g60630), 38 - MYB17 (At3g61250), 39 - SUS4 (At3g43190), 40 - TLP8 (At1g16070), 41 - APUM9 (At1g35730), 42 - DAN1 (At3g04620), 43 - KIN1 (At1g11050), 44 - AGL44 (At2g14210), 45 - PERK4 (At2g18470), 46 - DNA1 (At3g47680), 47 - PKS2 (At1g14280), 48 - AGL25 (At5g10140), 49 - FUS3 (At3g26790), 50 - IAA30 (At3g62100), 51 - LEC2 (At1g28300), 52 - ATGA2OX4 (At1g02400), 53 - LEA7 (At1g52690), 54 - CSP4 (At2g21060), 55 - AGL18 (At3g57390), 56 - DTA2 (At2g45830), 57 - CBF2 (At4g25470)].

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