Table 1 Reactions in the simplified model of the Calvin cycle
From: Dynamic regulatory on/off minimization for biological systems under internal temporal perturbations
Symbol Enzyme name | Biochemical reaction | Simplified reaction | v max | |
|---|---|---|---|---|
v1 | RuBisCo | RuBP + CO2 → 2 PGA | RuBP → 2 PGA | 3.78 |
v2 | PGA kinase | PGA + ATP → DPGA + ADP | PGA → DPGA | 11.75 |
v3 | GAP dehydrogenase | DPGA + NADPH → GAP + P + NADP | DPGA → GAP | 5.04 |
v4 |  | GAP → 0.6 Ru5P | GAP → 0.6 Ru5P | 3.05 |
v5 | Ru5P kinase | Ru5P + ATP → RuBP + ADP | Ru5P → RuBP | 8 |
v6 | Sink capacity | PGA → Sink | PGA → Sink | 3 |
v7 | Sink capacity | GAP → Sink | GAP → Sink | 0.1 |