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Table 1 Comparison of the network properties for the time- and condition-dependent minimal networks for AdaM and MADE

From: Integration of time-resolved transcriptomics data with flux-based methods reveals stress-induced metabolic adaptation in Escherichia coli

 

Metabolites

Reactions

EFMs

AdaM

416-427

480-486

1060 - 9582

MADE

545

658-806

†

original network

761

1075

†

  1. Given are the number of metabolites and reactions for the networks extracted by our approach and by MADE compared to the original network.
  2. ‡ Note that, with the currently available tools, only our approach extracts minimal networks for which the full set of EFMs can be computed.
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BMC Systems Biology

ISSN: 1752-0509

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