GraphAlignment: Bayesian pairwise alignment of biological networks

BMC Systems Biology

Table 1 Bio-molecular networks used in the analyses

	Protein-protein interaction networks
Source		StringDB		IntAct		Ref. [46]	Ref. [45]
Species	ecoli	ccres	cjeju	mmusc	hsapi	scere	hsapi
Vertices	822	477	369	7977	8984	2384	9141
Edges	1777	601	687	1594	26818	16070	41456
	Gene co-expression networks
Source		Colombos		M3D
Species	ecoli	sente	bsubt	ecoli	sonei
Vertices	1219	1104	2212	2162	2358
Edges	5589	4731	11181	4379	3823

bsubt: Bacillus subtilis, ccres: Caulobacter crescentus, cjeju: Campylobacter jejuni, ecoli: Escherichia coli, hsapi: human, mmusc: mouse, scere: Saccharomyces cerevisiae, sente: Salmonella enterica, sonei: Shewanella oneidensis.

ISSN: 1752-0509