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Table 4 Regulatory links confirmed for A. thaliana using gene expression data

From: Regulatory link mapping between organisms

  TFsf-TGblbs TFf-TGblbs TFsf-TGbs TFsf-TGpr TFf-TGpr TFf-TGgalf
Number of mapped TFs 118 434 118 118 434 434
Number of mapped TGs 2252 2252 35181 25259 25259 25388
Number of links mapped 43423 480524 536154 274400 3182551 242030
Number of links analyzed 3056 8621 6085 34529 236585 25227
2090 2628 2995 2343 93287 3727
2109 2375 2968 2323 101224 2012
58 344 30 26 12737 1715
103 215 100 66 19037 503
786 5687 2987 2050 87983 150
  1. Comparison of the six result sets of predicted regulatory links mapped from the S. cerevisiae genome to the A. thaliana genome. For every result set, the number of confirmed regulatory links is compared with the number of contradicted and neutral regulatory links to analyze the results. TFsf-TGblbs is the preferred set for regulatory links mapping.