Table 6 Summary information of association modules for microRNA expressions
index | driver type | drivers | reg | sign | N |
|---|---|---|---|---|---|
1 | inter CNV | seg 69 | SPOP,NME2,POLG2 | - | 38 |
2 | inter CNV | seg 55 | NR2C1,NFYB | - | 29 |
3 | inter CNV | seg 51 | RICS | + | 23 |
4 | inter CNV | seg 18 | ZIC1,MITF | - | 19 |
5 | inter CNV | seg 15 | DNMT1,MBD3 | + | 15 |
6 | inter CNV | seg 30 | SRF | + | 13 |
7 | inter CNV | seg 66 | MAP2K4 | - | 13 |
8 | inter CNV | seg 68 | BRCA1 | - | 12 |
9 | inter CNV | seg 13 | NFE2L2 | - | 10 |
10 | mutation | TP53 | NA | + | 17 |
11 | mutation | KRAS | NA | - | 15 |
12 | mutation | APC | NA | + | 10 |
13 | mutation | STK11 | NA | - | 10 |
14 | methylation | BCR | NA | - | 12 |
15 | TF | TF group | 1 NA | + | 28 |
16 | TF | MBD1 | NA | + | 19 |
17 | TF | TFE3 | NA | + | 18 |
18 | TF | BR2F1 | NA | + | 17 |
19 | TF | GRLF1 | NA | + | 15 |
20 | TF | HIF1A | NA | + | 14 |
21 | TF | E4F1 | NA | + | 12 |
22 | TF | TFDP1 | NA | + | 12 |
23 | TF | FOXM1 | NA | + | 11 |
24 | TF | ATF2 | NA | + | 10 |
25 | intra CNV | chr14p | NA | + | 14 |