Skip to main content

Table 1 Annotation of genes identified in EDNRB network.

From: Protein interaction network topology uncovers melanogenesis regulatory network components within functional genomics datasets

Symbol

Comments

Motifs

Z-score

EDNRB

Endothelin receptor type B. Mutation causes Hirschsprung disease type 2 (HSCR2) [MIM:600155]

7tm_1

-1.1

GNA11

G-protein activates phospholipase C in endothelin pathway

-1.9

EDN3

Ligand for endothelin receptor type B

EDN

0.2

PLCD1

Phospholipase produces diacylglycerol and inositol 1,4,5-trisphosphate in endothelin pathway

PH-PLC, C2_2, EFh

-1.5

TAOK1

Kinase activates the p38 MAP kinase pathway in endothelin pathway

SbcC, STKc_TAO

-0.2

PTK2B

Kinase regulates ion channel and activation of the MAP kinase signaling pathway in endothelin pathway

PTKc_FAK, FERM_M. Focal_AT, B41, Pkinase_Tyr

-1.9

AGTR1

Receptor for angiotensin II; defect causes renal tubular dysgenesis (RTD) [MIM:267430]

7tm_1

-1.7

RING1

E3 ubiquitin-protein ligase for histone H2A

RING-finger

0.5

FHOD1

Required for the assembly of F-actin structures

FH, GBD

0.2

DPYSL2

Signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton

D-HYD

-0.5

  1. Gene Ontology Database is used to assess function and identify conserved domains within the corresponding proteins. Z-scores are calculated based on the initial screen data [14].