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Table 2 Microarray statistics

From: A multi-level study of recombinant Pichia pastoris in different oxygen conditions

3904 annotated sequences, p≥ 0.05, no log2 fold change

comparison

threshold passed

up

down

% regulated

C 8/21

656

357

299

16.80

C 11/21

504

261

243

12.91

C 8/11

4

2

2

0.10

E 8/21

649

342

307

16.62

E 11/21

349

172

177

8.94

E 8/11

157

62

95

4.02

E/C 8

6

4

2

0.15

E/C 11

0

0

0

0.00

E/C 21

3

2

1

0.08

  1. Microarray statistics including all genes that passed the adjusted p-value threshold (p-value ≤ 0.05). Comparisons between oxygen setpoints within one strain (e.g. C 8/21) or between strains at a certain oxygen setpoint (E/C 8) are given. For pairwise comparisons, the type of gene regulation (up- or downregulated) always refers to the lower oxygen setpoint or to the expressing strain. C = control strain; E = expressing strain; 8 = hypoxia; 11 = oxygen limitation; 21 = normoxia