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Table 2 Simulated configurations of models A and A' compared to those observed in real roots of Arabidopsis thaliana

From: Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche

Cell type

PLT

Auxin

ARF

Aux/IAA

SHR

SCR

JKD

MGP

WOX5

QC

1(1)

1(1)

1(1)

0(0)

1(1)

1(1)

1(1)

0(0)

1(1)

Vascular Initials

1(1)

1(1)

1(1)

0(0)

1(1)

0(0)

0(0)

0(0)

0(0)

CEI

1(1)

1(1)

1(1)

0(0)

1(1)

1(1)

1(1)

1(1)

0(0)

CepI

1(1)

1(1)

1(1)

0(0)

0(0)

0(0)

0(0)

0(0)

0(0)

  1. A value of 1 means that the gene is "ON", whereas a value of 0 means that it is "OFF". Simulated gene states for each cell type are shown first and observed gene states are in parenthesis.