Skip to main content

Table 2 Boolean functions based on literature information.

From: Adapted Boolean network models for extracellular matrix formation

1

COL1A1.out

= (TGFB1 OR FOS OR JUN) AND NOT (TNF AND (NFKB1 OR ETS1))

2

COL1A2.out

= ((TGFB1 AND JUND) OR JUN) AND NOT (TNF AND (NFKB1 OR ETS1))

3

ETS1.out

= ((TNF AND (ETS1 OR JUN)) OR FOS) AND NOT SMAD4

4

FOS.out

= (TGFB1 OR (TNF AND NFKB1)) AND NOT (JUN AND FOS)

5

JUN.out

= (TNF AND JUN) OR SMAD4

6

JUNB.out

= (TGFB1 AND NFKB1 AND SMAD4) OR (TNF AND NFKB1)

7

JUND.out

= (TGFB1 OR TNF) AND JUND AND NOT FOS

8

MMP1.out

= ((TNF AND (ETS1 OR NFKB1)) OR FOS OR JUND) AND NOT TGFB1

9

MMP3.out

= (TNF AND (ETS1 OR JUN OR NFKB1)) OR FOS OR TGFB1

10

MMP9.out

= TNF AND (ETS1 OR NFKB1)

11

MMP13.out

= (TNF AND (JUN OR NFKB1)) OR FOS OR (TGFB1 AND SMAD4)

12

NFKB1.out

= (TNF AND (ETS1 OR NFKB1)) OR TGFB1

13

SMAD4.out

= TGFB1

14

SMAD7.out

= ((TGFB1 AND SMAD4) OR FOS OR JUN) AND NOT (TNF AND NFKB1)

15

TIMP1.out

= (TGFB1 AND SMAD4) OR (TNF AND (JUN OR JUNB OR JUND OR NFKB1)) OR FOS

16

TGFB1.out

= FOS OR JUND

17

TNF.out

= TNF AND (ETS1 OR JUN OR NFKB1)