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Figure 3 | BMC Systems Biology

Figure 3

From: A combinatorial approach to determine the context-dependent role in transcriptional and posttranscriptional regulation in Arabidopsis thaliana

Figure 3

An exemplar diagram of the inhomogeneous HMM. Hidden states are defined over the binary space {T, F}, where T means a true matching state and a matching state could generate A-U, U-A, G-C or C-G as an emission symbol. F means a false matching state and a false matching state could emit one of the remaining combinations except the aforementioned four symbols. The position specific transition probabilities and emission probabilities would be estimated using a training-set of potential miRNA targets. (The transition probabilities and emission probabilities shown in the diagram were arbitrarily assigned.)

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