Figure 1From: Detecting coordinated regulation of multi-protein complexes using logic analysis of gene expressionAnalysis outline. We first apply logic analysis to microarray data to identify gene triplets whose regulation obeys one of the possible logic functions such as the AND function: C is regulated iff A and B are regulated (the functions are described in detail in Additional file 1: Table S1). Next, using a curated set of protein complexes [19, 32], we map gene triplets onto complexes. Finally, we identify triplets of complexes and calculate their significance (see Methods section). The analysis enables us to predict coordinated regulation of these complexes.Back to article page